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1

Effect of etch-treatment upon the intensity and peak position of photoluminescence spectra for anodic alumina films with ordered nanopore array

Yi-Fan Liu, Ya-Fang Tu, Sheng-You Huang, Jian-Ping Sang, Xian-Wu Zou

Journal:

Journal of Materials Science

Year:

2009

Language:

english

File:

PDF, 361 KB

english, 2009

2

Porous Anodic Aluminum Oxide Bragg Stacks as Chemical Sensors

Guo, Dong-Lai, Fan, Li-Xia, Wang, Feng-Hua, Huang, Sheng-You, Zou, Xian-Wu

Journal:

The Journal of Physical Chemistry C

Year:

2008

Language:

english

File:

PDF, 1.25 MB

english, 2008

3

Search strategies and evaluation in protein–protein docking: principles, advances and challenges

Huang, Sheng-You

Journal:

Drug Discovery Today

Year:

2014

Language:

english

File:

PDF, 1.99 MB

english, 2014

4

Creation of trivalent transgenic watermelon resistant to virus infection

Sheng-Niao, Niu, Xue-Sen, Huang, Sek-Man, Wong, Jia-Lin, Yu, Fu-Xing, Zhao, Da-Wei, Li, Sheng-You, Wang, Guang-Ming, Zhai, Fan-Sheng, Shi

Journal:

Chinese Journal of Agricultural Biotechnology

Year:

2005

Language:

english

File:

PDF, 314 KB

english, 2005

5

Activation of Iodosobenzene by Catalytic Tetrabutylammonium Iodide and Its Application in the Oxidation of Some Isoquinoline Alkaloids

Wei-Jan Huang, Om V. Singh, Chung-Hsiung Chen, Sheng-You Chiou, Shoei-Sheng Lee

Journal:

Helvetica Chimica Acta

Year:

2002

Language:

english

File:

PDF, 116 KB

english, 2002

6

An iterative knowledge-based scoring function to predict protein–ligand interactions: II. Validation of the scoring function

Sheng-You Huang, Xiaoqin Zou

Journal:

Journal of Computational Chemistry

Year:

2006

Language:

english

File:

PDF, 467 KB

english, 2006

7

An iterative knowledge-based scoring function to predict protein–ligand interactions: I. Derivation of interaction potentials

Sheng-You Huang, Xiaoqin Zou

Journal:

Journal of Computational Chemistry

Year:

2006

Language:

english

File:

PDF, 333 KB

english, 2006

8

Structure properties and synchronizability of cobweb-like networks

Xiao-Long Zhu, Jian-Ping Sang, Li-Long Wang, Sheng-You Huang, Xian-Wu Zou

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2008

Language:

english

File:

PDF, 1.07 MB

english, 2008

9

Molecular modeling of the heterodimer of human CFTR’s nucleotide-binding domains using a protein–protein docking approach

Sheng-You Huang, Diana Bolser, Hao-Yang Liu, Tzyh-Chang Hwang, Xiaoqin Zou

Journal:

Journal of Molecular Graphics and Modelling

Year:

2009

Language:

english

File:

PDF, 1.94 MB

english, 2009

10

An inverse docking approach for identifying new potential anti-cancer targets

Sam Z. Grinter, Yayun Liang, Sheng-You Huang, Salman M. Hyder, Xiaoqin Zou

Journal:

Journal of Molecular Graphics and Modelling

Year:

2011

Language:

english

File:

PDF, 387 KB

english, 2011

11

Cutoff variation induces different topological properties: A new discovery of amino acid network within protein

Tao Yu, Xiaoqin Zou, Sheng-You Huang, Xian-Wu Zou

Journal:

Journal of Theoretical Biology

Year:

2009

Language:

english

File:

PDF, 736 KB

english, 2009

12

Structural class tendency of polypeptide: A new conception in predicting protein structural class

Tao Yu, Zhi-Bo Sun, Jian-Ping Sang, Sheng-You Huang, Xian-Wu Zou

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2007

Language:

english

File:

PDF, 178 KB

english, 2007

13

Thin-layer electrodeposition of Zn in the agar gel medium

Ya-Fang Tu, Xiao-Hui Chao, Jian-Ping Sang, Sheng-You Huang, Xian-Wu Zou

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2008

Language:

english

File:

PDF, 703 KB

english, 2008

14

Deposition, diffusion, and aggregation on small-world networks: a model for nanostructure growth on the defective substrate

Zhi-Gang Shao, Xian-Wu Zou, Zhi-Jie Tan, Sheng-You Huang, Zhun-Zhi Jin

Journal:

Physics Letters A

Year:

2004

Language:

english

File:

PDF, 134 KB

english, 2004

15

Short-time critical dynamics in two-dimensional vapor–liquid transition

Sheng-You Huang, Xian-Wu Zou, Zhi-Jie Tan, Zhun-Zhi Jin

Journal:

Physics Letters A

Year:

2002

Language:

english

File:

PDF, 78 KB

english, 2002

16

Molecular dynamics simulation of the energy localization of an impurity solved in 1D lattice

Sheng-You Huang, Xian-Wu Zou, Wen-Bing Zhang, Zhun-Zhi Jin

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2000

Language:

english

File:

PDF, 126 KB

english, 2000

17

Influence of the long-range interaction on the energy localization in 1D chain with an impurity

Sheng-You Huang, Xian-Wu Zou, Zhi-Jie Tan, Zhun-Zhi Jin

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2001

Language:

english

File:

PDF, 149 KB

english, 2001

18

Ensemble docking of multiple protein structures: Considering protein structural variations in molecular docking

Sheng-You Huang, Xiaoqin Zou

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 2.67 MB

english, 2007

19

An iterative knowledge-based scoring function for protein–protein recognition

Sheng-You Huang, Xiaoqin Zou

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 716 KB

english, 2008

20

MDockPP: A hierarchical approach for protein-protein docking and its application to CAPRI rounds 15–19

Sheng-You Huang, Xiaoqin Zou

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 545 KB

english, 2010

21

Statistical mechanics-based method to extract atomic distance-dependent potentials from protein structures

Sheng-You Huang, Xiaoqin Zou

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 627 KB

english, 2011

22

Effects of heat treatment on optical absorption properties of

Yi-Fan Liu, Feng-Hua Wang, Dong-Lai Guo, Sheng-You Huang, Jian-Ping Sang, Xian-Wu Zou

Journal:

Applied Physics A: Materials Science & Processing

Year:

2009

Language:

english

File:

PDF, 292 KB

english, 2009

23

Aspect ratio-dependent optical properties of Ni–P/AAO nano-array composite structure

Feng-Hua Wang, Ya-Fang Tu, Jian-Ping Sang, Sheng-You Huang, Xian-Wu Zou

Journal:

Journal of Materials Science

Year:

2010

Language:

english

File:

PDF, 352 KB

english, 2010

24

Particle–cluster aggregation by randomness and directive correlation of particle motion

Sheng-You Huang, Xian-Wu Zou, Zhi-Jie Tan, Zhun-Zhi Jin

Journal:

Physics Letters A

Year:

2001

Language:

english

File:

PDF, 202 KB

english, 2001

25

Particle–cluster aggregation with repulsive interactions on nonuniform substrates

Zhi-Jie Tan, Xian-Wu Zou, Sheng-You Huang, Zhun-Zhi Jin

Journal:

Physics Letters A

Year:

2002

Language:

english

File:

PDF, 325 KB

english, 2002

26

Efficient molecular docking of NMR structures: Application to HIV-1 protease

Sheng-You Huang, Xiaoqin Zou

Journal:

Protein Science

Year:

2007

Language:

english

File:

PDF, 549 KB

english, 2007

27

Similarities and Differences between Organic Cation Inhibition of the Na,K-ATPase and PMCA†

Gatto, Craig, Helms, Jeff B., Prasse, Megan C., Huang, Sheng-You, Zou, Xiaoqin, Arnett, Krista L., Milanick, Mark A.

Journal:

Year:

2006

Language:

english

File:

PDF, 621 KB

english, 2006

28

Interactions between PBEF and oxidative stress proteins – A potential new mechanism underlying PBEF in the pathogenesis of acute lung injury

Li Qin Zhang, Djanybek M. Adyshev, Patrick Singleton, Hailong Li, Javier Cepeda, Sheng-You Huang, Xiaoqin Zou, Alexander D. Verin, Jiancheng Tu, Joe G.N. Garcia, Shui Qing Ye

Journal:

Year:

2008

Language:

english

File:

PDF, 594 KB

english, 2008

29

Preparation of Fe-doped TiO2 nanotube arrays and their photocatalytic activities under visible light

Ya-Fang Tu, Sheng-You Huang, Jian-Ping Sang, Xian-Wu Zou

Journal:

Materials Research Bulletin

Year:

2010

Language:

english

File:

PDF, 721 KB

english, 2010

30

Scoring functions and their evaluation methods for protein–ligand docking: recent advances and future directions

Huang, Sheng-You, Grinter, Sam Z., Zou, Xiaoqin

Journal:

Physical Chemistry Chemical Physics

Year:

2010

Language:

english

File:

PDF, 1.57 MB

english, 2010

31

Synthesis and photocatalytic properties of Sn-doped TiO2 nanotube arrays

Ya-Fang Tu, Sheng-You Huang, Jian-Ping Sang, Xian-Wu Zou

Journal:

Journal of Alloys and Compounds

Year:

2009

Language:

english

File:

PDF, 612 KB

english, 2009

32

A nonredundant structure dataset for benchmarking protein-RNA computational docking

Huang, Sheng-You, Zou, Xiaoqin

Journal:

Journal of Computational Chemistry

Year:

2013

Language:

english

File:

PDF, 379 KB

english, 2013

33

Automated Large-Scale File Preparation, Docking, and Scoring: Evaluation of ITScore and STScore Using the 2012 Community Structure–Activity Resource Benchmark

Grinter, Sam Z., Yan, Chengfei, Huang, Sheng-You, Jiang, Lin, Zou, Xiaoqin

Journal:

Journal of Chemical Information and Modeling

Year:

2013

Language:

english

File:

PDF, 3.50 MB

english, 2013

34

Advances and Challenges in Protein-Ligand Docking

Huang, Sheng-You, Zou, Xiaoqin

Journal:

International Journal of Molecular Sciences

Year:

2010

Language:

english

File:

PDF, 180 KB

english, 2010

35

Construction and Test of Ligand Decoy Sets Using MDock: Community Structure–Activity Resource Benchmarks for Binding Mode Prediction

Huang, Sheng-You, Zou, Xiaoqin

Journal:

Journal of Chemical Information and Modeling

Year:

2011

Language:

english

File:

PDF, 3.83 MB

english, 2011

36

Scoring and Lessons Learned with the CSAR Benchmark Using an Improved Iterative Knowledge-Based Scoring Function

Huang, Sheng-You, Zou, Xiaoqin

Journal:

Journal of Chemical Information and Modeling

Year:

2011

Language:

english

File:

PDF, 3.00 MB

english, 2011

37

Inclusion of Solvation and Entropy in the Knowledge-Based Scoring Function for Protein−Ligand Interactions

Huang, Sheng-You, Zou, Xiaoqin

Journal:

Journal of Chemical Information and Modeling

Year:

2010

Language:

english

File:

PDF, 2.94 MB

english, 2010

38

Inclusion of the orientational entropic effect and low-resolution experimental information for protein-protein docking in Critical Assessment of PRedicted Interactions (CAPRI)

Huang, Sheng-You, Yan, Chengfei, Grinter, Sam Z., Chang, Shan, Jiang, Lin, Zou, Xiaoqin

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 4.42 MB

english, 2013

39

[Annual Reports in Computational Chemistry] Volume 6 || Mean-Force Scoring Functions for Protein–Ligand Binding

Huang, Sheng-You

Year:

2010

Language:

english

File:

PDF, 284 KB

english, 2010

40

)-Dimensional Deformable Medium

Huang, Sheng-You, Zou, Xian-Wu, Zhang, Wen-Bing, Jin, Zhun-Zhi

Journal:

Physical Review Letters

Year:

2002

Language:

english

File:

PDF, 230 KB

english, 2002

41

Random walk with memory enhancement and decay

Tan, Zhi-Jie, Zou, Xian-Wu, Huang, Sheng-You, Zhang, Wei, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2002

Language:

english

File:

PDF, 86 KB

english, 2002

42

Rational Truncation of an RNA Aptamer to Prostate-Specific Membrane Antigen Using Computational Structural Modeling

Rockey, William M., Hernandez, Frank J., Huang, Sheng-You, Cao, Song, Howell, Craig A., Thomas, Gregory S., Liu, Xiu Ying, Lapteva, Natalia, Spencer, David M., McNamara, James O., Zou, Xiaoqin, Chen,

Journal:

Nucleic Acid Therapeutics (Formerly Oligonucleotides)

Year:

2011

Language:

english

File:

PDF, 986 KB

english, 2011

43

Directed random walks in continuous space

Huang, Sheng-You, Zou, Xian-Wu, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2002

Language:

english

File:

PDF, 78 KB

english, 2002

44

Particle-cluster aggregation on a small-world network

Huang, Sheng-You, Zou, Xian-Wu, Shao, Zhi-Gang, Tan, Zhi-Jie, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2004

Language:

english

File:

PDF, 52 KB

english, 2004

45

Network-induced nonequilibrium phase transition in the “game of Life”

Huang, Sheng-You, Zou, Xian-Wu, Tan, Zhi-Jie, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2003

Language:

english

File:

PDF, 92 KB

english, 2003

46

Patterns of particle distribution in multiparticle systems by random walks with memory enhancement and decay

Tan, Zhi-Jie, Zou, Xian-Wu, Huang, Sheng-You, Zhang, Wei, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2002

Language:

english

File:

PDF, 261 KB

english, 2002

47

Critical behavior of efficiency dynamics in small-world networks

Huang, Sheng-You, Zou, Xian-Wu, Tan, Zhi-Jie, Shao, Zhi-Gang, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2003

Language:

english

File:

PDF, 81 KB

english, 2003

48

Deposition, diffusion, and aggregation on Leath percolations: A model for nanostructure growth on nonuniform substrates

Tan, Zhi-Jie, Zou, Xian-Wu, Huang, Sheng-You, Jin, Zhun-Zhi

Journal:

Physical Review B

Year:

2002

Language:

english

File:

PDF, 351 KB

english, 2002

49

Multiparticle random walks on a deformable medium

Huang, Sheng-You, Zou, Xian-Wu, Jin, Zhun-Zhi

Journal:

Physical Review E

Year:

2002

Language:

english

File:

PDF, 111 KB

english, 2002

50

on agar plates

Tu, Ya-Fang, Wei, Rong-Bin, Sang, Jian-Ping, Huang, Sheng-You, Zou, Xian-Wu

Journal:

Physical Review E

Year:

2008

Language:

english

File:

PDF, 1.36 MB

english, 2008